When truing a fingerboard I like to use a neck jig.  This aids in the process.
The nut is then removed.
I like to heat frets as I remove them.    
Checking the boards radius
Using the neck jig to “zero” out the neck.
I use a long sanding block to true the neck.  In these pictures you can see the high spots after a few swipes with the block
Checking the board with a straight edge and cleaning out the fret slots.
Here I am measuring the fret slots for the correct fret tang
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